Sequenced Read Pairs: 3,693,382 Normal Paired: 1,117,354 (30.25%) Chimeric Paired: 908,670 (24.60%) Chimeric Ambiguous: 341,139 (9.24%) Unmapped: 1,326,219 (35.91%) Ligation Motif Present: 2,031,034 (54.99%) Alignable (Normal+Chimeric Paired): 2,026,024 (54.86%) Unique Reads: 602,501 (16.31%) PCR Duplicates: 449,451 (12.17%) Optical Duplicates: 974,072 (26.37%) Library Complexity Estimate: 847,357 Intra-fragment Reads: 29,863 (0.81% / 4.96%) Below MAPQ Threshold: 37,393 (1.01% / 6.21%) Hi-C Contacts: 535,245 (14.49% / 88.84%) Ligation Motif Present: 279,514 (7.57% / 46.39%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 17% - 50% - 16% - 17% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 26% DE: 31% Cis/all (FF and RR orient): 94.6% Inter-chromosomal: 19,902 (0.54% / 3.30%) Intra-chromosomal: 515,343 (13.95% / 85.53%) Short Range (<20,000bp): 299,365 (8.11% / 49.69%) Long Range (>20,000bp): 215,978 (5.85% / 35.85%)