Sequenced Read Pairs: 4,489,049 Normal Paired: 972,979 (21.67%) Chimeric Paired: 680,250 (15.15%) Chimeric Ambiguous: 278,632 (6.21%) Unmapped: 2,557,188 (56.97%) Ligation Motif Present: 1,852,751 (41.27%) Alignable (Normal+Chimeric Paired): 1,653,229 (36.83%) Unique Reads: 485,826 (10.82%) PCR Duplicates: 333,712 (7.43%) Optical Duplicates: 833,691 (18.57%) Library Complexity Estimate: 708,997 Intra-fragment Reads: 35,485 (0.79% / 7.30%) Below MAPQ Threshold: 29,024 (0.65% / 5.97%) Hi-C Contacts: 421,317 (9.39% / 86.72%) Ligation Motif Present: 223,421 (4.98% / 45.99%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 16% - 53% - 15% - 16% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 24% - 26% DE: 36% Cis/all (FF and RR orient): 99.5% Inter-chromosomal: 1,218 (0.03% / 0.25%) Intra-chromosomal: 420,099 (9.36% / 86.47%) Short Range (<20,000bp): 283,030 (6.30% / 58.26%) Long Range (>20,000bp): 137,069 (3.05% / 28.21%)