Sequenced Read Pairs: 5,477,056 Normal Paired: 990,486 (18.08%) Chimeric Paired: 609,106 (11.12%) Chimeric Ambiguous: 312,521 (5.71%) Unmapped: 3,564,943 (65.09%) Ligation Motif Present: 1,957,829 (35.75%) Alignable (Normal+Chimeric Paired): 1,599,592 (29.21%) Unique Reads: 566,946 (10.35%) PCR Duplicates: 385,765 (7.04%) Optical Duplicates: 646,881 (11.81%) Library Complexity Estimate: 831,010 Intra-fragment Reads: 45,452 (0.83% / 8.02%) Below MAPQ Threshold: 31,001 (0.57% / 5.47%) Hi-C Contacts: 490,493 (8.96% / 86.51%) Ligation Motif Present: 284,036 (5.19% / 50.10%) 3' Bias (Long Range): 76% - 24% Pair Type intra chrom %(L-I-O-R): 15% - 57% - 14% - 15% Pair Type inter chrom %(L-I-O-R): 27% - 24% - 24% - 25% DE: 41% Cis/all (FF and RR orient): 99.5% Inter-chromosomal: 1,353 (0.02% / 0.24%) Intra-chromosomal: 489,140 (8.93% / 86.28%) Short Range (<20,000bp): 329,126 (6.01% / 58.05%) Long Range (>20,000bp): 160,014 (2.92% / 28.22%)