Sequenced Read Pairs: 4,664,163 Normal Paired: 542,096 (11.62%) Chimeric Paired: 260,147 (5.58%) Chimeric Ambiguous: 129,445 (2.78%) Unmapped: 3,732,475 (80.02%) Ligation Motif Present: 1,517,459 (32.53%) Alignable (Normal+Chimeric Paired): 802,243 (17.20%) Unique Reads: 268,565 (5.76%) PCR Duplicates: 529,199 (11.35%) Optical Duplicates: 4,479 (0.10%) Library Complexity Estimate: 286,185 Intra-fragment Reads: 36,148 (0.78% / 13.46%) Below MAPQ Threshold: 19,848 (0.43% / 7.39%) Hi-C Contacts: 212,569 (4.56% / 79.15%) Ligation Motif Present: 61,422 (1.32% / 22.87%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 13% - 62% - 12% - 13% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 26% - 25% DE: 46% Cis/all (FF and RR orient): 90.9% Inter-chromosomal: 10,478 (0.22% / 3.90%) Intra-chromosomal: 202,091 (4.33% / 75.25%) Short Range (<20,000bp): 141,537 (3.03% / 52.70%) Long Range (>20,000bp): 60,554 (1.30% / 22.55%)