Sequenced Read Pairs: 5,363,433 Normal Paired: 2,572,344 (47.96%) Chimeric Paired: 1,499,058 (27.95%) Chimeric Ambiguous: 617,480 (11.51%) Unmapped: 674,551 (12.58%) Ligation Motif Present: 3,101,756 (57.83%) Alignable (Normal+Chimeric Paired): 4,071,402 (75.91%) Unique Reads: 2,237,271 (41.71%) PCR Duplicates: 1,791,332 (33.40%) Optical Duplicates: 42,799 (0.80%) Library Complexity Estimate: 3,053,520 Intra-fragment Reads: 138,074 (2.57% / 6.17%) Below MAPQ Threshold: 114,774 (2.14% / 5.13%) Hi-C Contacts: 1,984,423 (37.00% / 88.70%) Ligation Motif Present: 958,286 (17.87% / 42.83%) 3' Bias (Long Range): 72% - 28% Pair Type intra chrom %(L-I-O-R): 16% - 53% - 15% - 16% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25% DE: 34% Cis/all (FF and RR orient): 87.4% Inter-chromosomal: 166,280 (3.10% / 7.43%) Intra-chromosomal: 1,818,143 (33.90% / 81.27%) Short Range (<20,000bp): 1,077,701 (20.09% / 48.17%) Long Range (>20,000bp): 740,442 (13.81% / 33.10%)