Sequenced Read Pairs: 3,693,382 Normal Paired: 1,115,704 (30.21%) Chimeric Paired: 907,652 (24.58%) Chimeric Ambiguous: 347,383 (9.41%) Unmapped: 1,322,643 (35.81%) Ligation Motif Present: 2,031,034 (54.99%) Alignable (Normal+Chimeric Paired): 2,023,356 (54.78%) Unique Reads: 608,074 (16.46%) PCR Duplicates: 445,355 (12.06%) Optical Duplicates: 969,927 (26.26%) Library Complexity Estimate: 862,100 Intra-fragment Reads: 29,693 (0.80% / 4.88%) Below MAPQ Threshold: 45,372 (1.23% / 7.46%) Hi-C Contacts: 533,009 (14.43% / 87.66%) Ligation Motif Present: 278,027 (7.53% / 45.72%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 17% - 50% - 16% - 17% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25% DE: 31% Cis/all (FF and RR orient): 94.8% Inter-chromosomal: 19,351 (0.52% / 3.18%) Intra-chromosomal: 513,658 (13.91% / 84.47%) Short Range (<20,000bp): 298,177 (8.07% / 49.04%) Long Range (>20,000bp): 215,481 (5.83% / 35.44%)