Sequenced Read Pairs: 4,489,049 Normal Paired: 972,354 (21.66%) Chimeric Paired: 679,593 (15.14%) Chimeric Ambiguous: 283,367 (6.31%) Unmapped: 2,553,735 (56.89%) Ligation Motif Present: 1,852,751 (41.27%) Alignable (Normal+Chimeric Paired): 1,651,947 (36.80%) Unique Reads: 490,629 (10.93%) PCR Duplicates: 331,284 (7.38%) Optical Duplicates: 830,034 (18.49%) Library Complexity Estimate: 721,720 Intra-fragment Reads: 35,396 (0.79% / 7.21%) Below MAPQ Threshold: 35,441 (0.79% / 7.22%) Hi-C Contacts: 419,792 (9.35% / 85.56%) Ligation Motif Present: 222,181 (4.95% / 45.28%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 16% - 53% - 15% - 16% Pair Type inter chrom %(L-I-O-R): 23% - 27% - 25% - 25% DE: 36% Cis/all (FF and RR orient): 99.7% Inter-chromosomal: 912 (0.02% / 0.19%) Intra-chromosomal: 418,880 (9.33% / 85.38%) Short Range (<20,000bp): 281,900 (6.28% / 57.46%) Long Range (>20,000bp): 136,980 (3.05% / 27.92%)