Sequenced Read Pairs: 5,477,056 Normal Paired: 989,796 (18.07%) Chimeric Paired: 608,067 (11.10%) Chimeric Ambiguous: 317,319 (5.79%) Unmapped: 3,561,874 (65.03%) Ligation Motif Present: 1,957,829 (35.75%) Alignable (Normal+Chimeric Paired): 1,597,863 (29.17%) Unique Reads: 571,129 (10.43%) PCR Duplicates: 384,255 (7.02%) Optical Duplicates: 642,479 (11.73%) Library Complexity Estimate: 841,548 Intra-fragment Reads: 45,168 (0.82% / 7.91%) Below MAPQ Threshold: 37,257 (0.68% / 6.52%) Hi-C Contacts: 488,704 (8.92% / 85.57%) Ligation Motif Present: 282,596 (5.16% / 49.48%) 3' Bias (Long Range): 76% - 24% Pair Type intra chrom %(L-I-O-R): 15% - 56% - 14% - 15% Pair Type inter chrom %(L-I-O-R): 26% - 26% - 26% - 23% DE: 41% Cis/all (FF and RR orient): 99.7% Inter-chromosomal: 966 (0.02% / 0.17%) Intra-chromosomal: 487,738 (8.91% / 85.40%) Short Range (<20,000bp): 327,860 (5.99% / 57.41%) Long Range (>20,000bp): 159,878 (2.92% / 27.99%)