Sequenced Read Pairs: 9,399,322 Normal Paired: 1,684,485 (17.92%) Chimeric Paired: 831,567 (8.85%) Chimeric Ambiguous: 595,646 (6.34%) Unmapped: 6,287,624 (66.89%) Ligation Motif Present: 3,643,301 (38.76%) Alignable (Normal+Chimeric Paired): 2,516,052 (26.77%) Unique Reads: 666,965 (7.10%) PCR Duplicates: 1,843,079 (19.61%) Optical Duplicates: 6,008 (0.06%) Library Complexity Estimate: 684,450 Intra-fragment Reads: 102,548 (1.09% / 15.38%) Below MAPQ Threshold: 63,967 (0.68% / 9.59%) Hi-C Contacts: 500,450 (5.32% / 75.03%) Ligation Motif Present: 269,600 (2.87% / 40.42%) 3' Bias (Long Range): 75% - 25% Pair Type intra chrom %(L-I-O-R): 14% - 59% - 13% - 14% Pair Type inter chrom %(L-I-O-R): 29% - 22% - 27% - 23% DE: 43% Cis/all (FF and RR orient): 99.4% Inter-chromosomal: 1,739 (0.02% / 0.26%) Intra-chromosomal: 498,711 (5.31% / 74.77%) Short Range (<20,000bp): 383,917 (4.08% / 57.56%) Long Range (>20,000bp): 114,794 (1.22% / 17.21%)