Sequenced Read Pairs: 4,143,338 Normal Paired: 922,393 (22.26%) Chimeric Paired: 442,978 (10.69%) Chimeric Ambiguous: 296,595 (7.16%) Unmapped: 2,481,372 (59.89%) Ligation Motif Present: 1,707,669 (41.21%) Alignable (Normal+Chimeric Paired): 1,365,371 (32.95%) Unique Reads: 315,628 (7.62%) PCR Duplicates: 1,046,811 (25.26%) Optical Duplicates: 2,932 (0.07%) Library Complexity Estimate: 320,170 Intra-fragment Reads: 40,894 (0.99% / 12.96%) Below MAPQ Threshold: 38,365 (0.93% / 12.16%) Hi-C Contacts: 236,369 (5.70% / 74.89%) Ligation Motif Present: 120,149 (2.90% / 38.07%) 3' Bias (Long Range): 79% - 21% Pair Type intra chrom %(L-I-O-R): 13% - 63% - 12% - 13% Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 24% DE: 43% Cis/all (FF and RR orient): 78.0% Inter-chromosomal: 29,920 (0.72% / 9.48%) Intra-chromosomal: 206,449 (4.98% / 65.41%) Short Range (<20,000bp): 141,941 (3.43% / 44.97%) Long Range (>20,000bp): 64,508 (1.56% / 20.44%)