Sequenced Read Pairs: 3,206,900 Normal Paired: 503,632 (15.70%) Chimeric Paired: 306,566 (9.56%) Chimeric Ambiguous: 147,063 (4.59%) Unmapped: 2,249,639 (70.15%) Ligation Motif Present: 1,190,287 (37.12%) Alignable (Normal+Chimeric Paired): 810,198 (25.26%) Unique Reads: 323,219 (10.08%) PCR Duplicates: 484,040 (15.09%) Optical Duplicates: 2,939 (0.09%) Library Complexity Estimate: 362,221 Intra-fragment Reads: 31,658 (0.99% / 9.79%) Below MAPQ Threshold: 24,442 (0.76% / 7.56%) Hi-C Contacts: 267,119 (8.33% / 82.64%) Ligation Motif Present: 123,385 (3.85% / 38.17%) 3' Bias (Long Range): 74% - 26% Pair Type intra chrom %(L-I-O-R): 15% - 56% - 14% - 15% Pair Type inter chrom %(L-I-O-R): 25% - 23% - 28% - 23% DE: 39% Cis/all (FF and RR orient): 99.4% Inter-chromosomal: 991 (0.03% / 0.31%) Intra-chromosomal: 266,128 (8.30% / 82.34%) Short Range (<20,000bp): 202,745 (6.32% / 62.73%) Long Range (>20,000bp): 63,383 (1.98% / 19.61%)