Experiment description: Juicer version 1.5.6;23 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 23 -d /mnt/scratch/ws/sykozyreva/202208051313data/Parus_Major/tit -p /mnt/scratch/ws/sykozyreva/202208051313data/Parus_Major/Parus_Major.chrom.sizes -q 30 -n Parus_Major -y /mnt/scratch/ws/sykozyreva/202208051313data/Parus_Major/Parus_Major.DpnII.juicer.txt -z /mnt/scratch/ws/sykozyreva/202208051313data/Parus_Major/Parus_Major.fasta -o /mnt/scratch/ws/sykozyreva/202208051313data/Parus_Major/PM_processed4 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  66,503,087
 Normal Paired: 28,595,066 (43.00%)
 Chimeric Paired: 28,974,792 (43.57%)
 Chimeric Ambiguous: 3,613,651 (5.43%)
 Unmapped: 5,319,578 (8.00%)
 Ligation Motif Present: 53,202,727 (80.00%)
Alignable (Normal+Chimeric Paired): 57,569,858 (86.57%)
Unique Reads: 54,267,110 (81.60%)
PCR Duplicates: 3,302,748 (4.97%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 482,367,836
Intra-fragment Reads: 1,093,325 (1.64% / 2.01%)
Below MAPQ Threshold: 3,511,029 (5.28% / 6.47%)
Hi-C Contacts: 49,662,756 (74.68% / 91.52%)
 Ligation Motif Present: 29,903,038  (44.96% / 55.10%)
 3' Bias (Long Range): 81% - 19%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 6,226,812  (9.36% / 11.47%)
Intra-chromosomal: 43,435,944  (65.31% / 80.04%)
Short Range (<20Kb): 21,285,316  (32.01% / 39.22%)
Long Range (>20Kb): 22,150,592  (33.31% / 40.82%)