Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g mm10 -z /Data/DataBases/mm10/mm10_canonic.fa -p /Data/DataBases/mm10/mm10_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_mm10.txt -d /Data/NGS_Data/20211129_Maria_NGS_data_run143/Result/50                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  93,903
 Normal Paired: 42,241 (44.98%)
 Chimeric Paired: 38,981 (41.51%)
 Chimeric Ambiguous: 11,489 (12.23%)
 Unmapped: 1,192 (1.27%)
 Ligation Motif Present: 69,796 (74.33%)
Alignable (Normal+Chimeric Paired): 81,222 (86.50%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-29T13:42:27,716]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 80,955 (86.21%)
PCR Duplicates: 121 (0.13%)
Optical Duplicates: 146 (0.16%)
Library Complexity Estimate: 27,135,438
Intra-fragment Reads: 3,474 (3.70% / 4.29%)
Below MAPQ Threshold: 11,416 (12.16% / 14.10%)
Hi-C Contacts: 66,065 (70.35% / 81.61%)
 Ligation Motif Present: 50,211  (53.47% / 62.02%)
 3' Bias (Long Range): 68% - 32%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 26%
Inter-chromosomal: 12,145  (12.93% / 15.00%)
Intra-chromosomal: 53,920  (57.42% / 66.60%)
Short Range (<20Kb): 25,445  (27.10% / 31.43%)
Long Range (>20Kb): 28,475  (30.32% / 35.17%)