Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g mm10 -z /Data/DataBases/mm10/mm10_canonic.fa -p /Data/DataBases/mm10/mm10_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_mm10.txt -d /Data/NGS_Data/20211129_Maria_NGS_data_run143/Result/50                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  93,903
 Normal Paired: 42,241 (44.98%)
 Chimeric Paired: 38,981 (41.51%)
 Chimeric Ambiguous: 11,489 (12.23%)
 Unmapped: 1,192 (1.27%)
 Ligation Motif Present: 69,796 (74.33%)
Alignable (Normal+Chimeric Paired): 81,222 (86.50%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-29T13:42:27,716]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 80,955 (86.21%)
PCR Duplicates: 121 (0.13%)
Optical Duplicates: 146 (0.16%)
Library Complexity Estimate: 27,135,438
Intra-fragment Reads: 3,474 (3.70% / 4.29%)
Below MAPQ Threshold: 16,124 (17.17% / 19.92%)
Hi-C Contacts: 61,357 (65.34% / 75.79%)
 Ligation Motif Present: 46,752  (49.79% / 57.75%)
 3' Bias (Long Range): 68% - 32%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 26%
Inter-chromosomal: 10,687  (11.38% / 13.20%)
Intra-chromosomal: 50,670  (53.96% / 62.59%)
Short Range (<20Kb): 24,242  (25.82% / 29.95%)
Long Range (>20Kb): 26,428  (28.14% / 32.65%)