Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g mm10 -z /Data/DataBases/mm10/mm10_canonic.fa -p /Data/DataBases/mm10/mm10_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_mm10.txt -d /Data/NGS_Data/20211129_Maria_NGS_data_run143/Result/52                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  128,371
 Normal Paired: 81,063 (63.15%)
 Chimeric Paired: 37,236 (29.01%)
 Chimeric Ambiguous: 8,447 (6.58%)
 Unmapped: 1,625 (1.27%)
 Ligation Motif Present: 60,872 (47.42%)
Alignable (Normal+Chimeric Paired): 118,299 (92.15%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-29T13:49:03,146]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 117,691 (91.68%)
PCR Duplicates: 349 (0.27%)
Optical Duplicates: 259 (0.20%)
Library Complexity Estimate: 19,922,584
Intra-fragment Reads: 18,242 (14.21% / 15.50%)
Below MAPQ Threshold: 14,798 (11.53% / 12.57%)
Hi-C Contacts: 84,651 (65.94% / 71.93%)
 Ligation Motif Present: 45,725  (35.62% / 38.85%)
 3' Bias (Long Range): 64% - 36%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 13,074  (10.18% / 11.11%)
Intra-chromosomal: 71,577  (55.76% / 60.82%)
Short Range (<20Kb): 48,338  (37.65% / 41.07%)
Long Range (>20Kb): 23,239  (18.10% / 19.75%)