Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g mm10 -z /Data/DataBases/mm10/mm10_canonic.fa -p /Data/DataBases/mm10/mm10_canonic.chrom.sizes -s DpnII -y /Data/UserData/FairWind/Ya.Cloud/core/pipeline/data/restriction_sites/RestrictionSites_DpnII_mm10.txt -d /Data/NGS_Data/20211129_Maria_NGS_data_run143/Result/52                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  128,371
 Normal Paired: 81,063 (63.15%)
 Chimeric Paired: 37,236 (29.01%)
 Chimeric Ambiguous: 8,447 (6.58%)
 Unmapped: 1,625 (1.27%)
 Ligation Motif Present: 60,872 (47.42%)
Alignable (Normal+Chimeric Paired): 118,299 (92.15%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-11-29T13:49:03,146]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 117,691 (91.68%)
PCR Duplicates: 349 (0.27%)
Optical Duplicates: 259 (0.20%)
Library Complexity Estimate: 19,922,584
Intra-fragment Reads: 18,242 (14.21% / 15.50%)
Below MAPQ Threshold: 20,149 (15.70% / 17.12%)
Hi-C Contacts: 79,300 (61.77% / 67.38%)
 Ligation Motif Present: 42,756  (33.31% / 36.33%)
 3' Bias (Long Range): 64% - 36%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 11,616  (9.05% / 9.87%)
Intra-chromosomal: 67,684  (52.73% / 57.51%)
Short Range (<20Kb): 46,116  (35.92% / 39.18%)
Long Range (>20Kb): 21,568  (16.80% / 18.33%)