Experiment description: Juicer version 1.5.6;4 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 4 -d /mnt/storage/home/manuriddinov/scratch/fastq/ulitka -p /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.chrom.sizes -y /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.MboI.juicer.txt -q -1 -n ulitka_flye -l 1000000,500000,250000,100000,50000,25000,10000,5000,1000 -z /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/ulitka_flye -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  49,269,687
 Normal Paired: 26,012,710 (52.80%)
 Chimeric Paired: 7,239,732 (14.69%)
 Chimeric Ambiguous: 14,718,850 (29.87%)
 Unmapped: 1,298,395 (2.64%)
 Ligation Motif Present: 30,041,680 (60.97%)
Alignable (Normal+Chimeric Paired): 33,252,442 (67.49%)
Unique Reads: 32,898,826 (66.77%)
PCR Duplicates: 353,616 (0.72%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,552,350,377
Intra-fragment Reads: 3,685,808 (7.48% / 11.20%)
Below MAPQ Threshold: 19,986,330 (40.57% / 60.75%)
Hi-C Contacts: 9,226,688 (18.73% / 28.05%)
 Ligation Motif Present: 4,991,552  (10.13% / 15.17%)
 3' Bias (Long Range): 71% - 29%
 Pair Type intra chrom %(L-I-O-R): 5% - 86% - 5% - 5%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 57%
 Cis/all (FF and RR orient): 30.2%
Inter-chromosomal: 2,760,659  (5.60% / 8.39%)
Intra-chromosomal: 6,466,029  (13.12% / 19.65%)
Short Range (<20,000bp): 5,836,597  (11.85% / 17.74%)
Long Range (>20,000bp): 629,432  (1.28% / 1.91%)