Experiment description: Juicer version 1.5.6;4 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 4 -d /mnt/storage/home/manuriddinov/scratch/fastq/ulitka -p /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.chrom.sizes -y /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.MboI.juicer.txt -q -1 -n ulitka_flye -l 1000000,500000,250000,100000,50000,25000,10000,5000,1000 -z /mnt/storage/home/manuriddinov/MyData/Mollusca/genome/joinscf/ulitka_flye/ulitka_flye.fa -o /mnt/storage/home/manuriddinov/scratch/Invertebrates/ulitka_flye -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                    
Sequenced Read Pairs:  49,269,687
 Normal Paired: 26,012,710 (52.80%)
 Chimeric Paired: 7,239,732 (14.69%)
 Chimeric Ambiguous: 14,718,850 (29.87%)
 Unmapped: 1,298,395 (2.64%)
 Ligation Motif Present: 30,041,680 (60.97%)
Alignable (Normal+Chimeric Paired): 33,252,442 (67.49%)
Unique Reads: 32,898,826 (66.77%)
PCR Duplicates: 353,616 (0.72%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,552,350,377
Intra-fragment Reads: 3,685,808 (7.48% / 11.20%)
Below MAPQ Threshold: 0 (0.00% / 0.00%)
Hi-C Contacts: 29,213,018 (59.29% / 88.80%)
 Ligation Motif Present: 13,679,550  (27.76% / 41.58%)
 3' Bias (Long Range): 65% - 35%
 Pair Type intra chrom %(L-I-O-R): 11% - 67% - 11% - 11%
 Pair Type inter chrom %(L-I-O-R): 26% - 24% - 24% - 26%
 DE: 21%
 Cis/all (FF and RR orient): 20.2%
Inter-chromosomal: 18,132,429  (36.80% / 55.12%)
Intra-chromosomal: 11,080,589  (22.49% / 33.68%)
Short Range (<20,000bp): 7,367,755  (14.95% / 22.40%)
Long Range (>20,000bp): 3,712,834  (7.54% / 11.29%)