Experiment description: Juicer version 1.5.6; BWA 0.7.13-r1126; 23 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 23 -d /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/raw/HybPhM -p /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/genome/hg38_AsteI2_V4_plasmids/hg38_AsteI2_V4_plasmids.chr.sizes -q 30 -n HybPhM -s none -z /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/genome/hg38_AsteI2_V4_plasmids/hg38_AsteI2_V4_plasmids.fa -o /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/HybPhM_processed2 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                 
Sequenced Read Pairs:  6,526,749
 Normal Paired: 2,701,292 (41.39%)
 Chimeric Paired: 3,099,996 (47.50%)
 Chimeric Ambiguous: 684,607 (10.49%)
 Unmapped: 40,854 (0.63%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 5,801,288 (88.88%)
Unique Reads: 5,717,311 (87.60%)
PCR Duplicates: 83,977 (1.29%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 198,443,440
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 990,641 (15.18% / 17.33%)
Hi-C Contacts: 4,726,670 (72.42% / 82.67%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 809,452  (12.40% / 14.16%)
Intra-chromosomal: 3,917,218  (60.02% / 68.52%)
Short Range (<20Kb): 1,991,612  (30.51% / 34.83%)
Long Range (>20Kb): 1,925,463  (29.50% / 33.68%)