Experiment description: Juicer version 1.5.6; BWA 0.7.13-r1126; 23 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 23 -d /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/raw/PhoenixMSQ -p /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/genome/hg38_AsteI2_V4_plasmids/hg38_AsteI2_V4_plasmids.chr.sizes -q 30 -n PhoenixMSQ -s none -z /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/genome/hg38_AsteI2_V4_plasmids/hg38_AsteI2_V4_plasmids.fa -o /mnt/scratch/ws/psbelokopytova/202206141106Polina_data/human_anopheles_hybrid/PhoenixMSQ_processed2 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                     
Sequenced Read Pairs:  659,024
 Normal Paired: 277,116 (42.05%)
 Chimeric Paired: 306,044 (46.44%)
 Chimeric Ambiguous: 69,718 (10.58%)
 Unmapped: 6,146 (0.93%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 583,160 (88.49%)
Unique Reads: 575,912 (87.39%)
PCR Duplicates: 7,248 (1.10%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 23,265,168
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 54,628 (8.29% / 9.49%)
Hi-C Contacts: 521,284 (79.10% / 90.51%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 77,853  (11.81% / 13.52%)
Intra-chromosomal: 443,431  (67.29% / 77.00%)
Short Range (<20Kb): 235,626  (35.75% / 40.91%)
Long Range (>20Kb): 207,772  (31.53% / 36.08%)