Experiment description: MoPh7_AsteI2_V4_first
Sequenced Read Pairs:  28,003,802
 Normal Paired: 3,788,072 (13.53%)
 Chimeric Paired: 1,254,142 (4.48%)
 Chimeric Ambiguous: 1,067,366 (3.81%)
 Unmapped: 21,894,222 (78.18%)
 Ligation Motif Present: 24,253,135 (86.61%)
Alignable (Normal+Chimeric Paired): 5,042,214 (18.01%)
Unique Reads: 3,360,293 (12.00%)
PCR Duplicates: 685,965 (2.45%)
Optical Duplicates: 995,956 (3.56%)
Library Complexity Estimate: 10,542,948
Intra-fragment Reads: 151,671 (0.54% / 4.51%)
Below MAPQ Threshold: 930,898 (3.32% / 27.70%)
Hi-C Contacts: 2,277,724 (8.13% / 67.78%)
 Ligation Motif Present: 1,691,840  (6.04% / 50.35%)
 3' Bias (Long Range): 70% - 30%
 Pair Type intra chrom %(L-I-O-R): 9% - 72% - 9% - 9%
 Pair Type inter chrom %(L-I-O-R): 26% - 25% - 25% - 24%
 DE: 50%
 Cis/all (FF and RR orient): 61.5%
Inter-chromosomal: 435,247  (1.55% / 12.95%)
Intra-chromosomal: 1,842,477  (6.58% / 54.83%)
Short Range (<20,000bp): 1,345,313  (4.80% / 40.04%)
Long Range (>20,000bp): 497,164  (1.78% / 14.80%)