Experiment description: MoPh11_AsteI2_V4_raw
Sequenced Read Pairs:  29,577,994
 Normal Paired: 411,270 (1.39%)
 Chimeric Paired: 74,053 (0.25%)
 Chimeric Ambiguous: 27,735 (0.09%)
 Unmapped: 29,064,936 (98.27%)
 Ligation Motif Present: 19,436,952 (65.71%)
Alignable (Normal+Chimeric Paired): 485,323 (1.64%)
Unique Reads: 454,365 (1.54%)
PCR Duplicates: 30,958 (0.10%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 3,640,605
Intra-fragment Reads: 34,376 (0.12% / 7.57%)
Below MAPQ Threshold: 66,054 (0.22% / 14.54%)
Hi-C Contacts: 353,935 (1.20% / 77.90%)
 Ligation Motif Present: 215,930  (0.73% / 47.52%)
 3' Bias (Long Range): 64% - 36%
 Pair Type intra chrom %(L-I-O-R): 9% - 72% - 9% - 9%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 55%
 Cis/all (FF and RR orient): 71.9%
Inter-chromosomal: 44,674  (0.15% / 9.83%)
Intra-chromosomal: 309,261  (1.05% / 68.06%)
Short Range (<20,000bp): 231,967  (0.78% / 51.05%)
Long Range (>20,000bp): 77,294  (0.26% / 17.01%)