Experiment description: MoPh14_AsteI2_V4_raw
Sequenced Read Pairs:  22,259,795
 Normal Paired: 163,969 (0.74%)
 Chimeric Paired: 22,992 (0.10%)
 Chimeric Ambiguous: 7,138 (0.03%)
 Unmapped: 22,065,696 (99.13%)
 Ligation Motif Present: 11,154,677 (50.11%)
Alignable (Normal+Chimeric Paired): 186,961 (0.84%)
Unique Reads: 171,899 (0.77%)
PCR Duplicates: 15,062 (0.07%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,097,155
Intra-fragment Reads: 12,861 (0.06% / 7.48%)
Below MAPQ Threshold: 15,519 (0.07% / 9.03%)
Hi-C Contacts: 143,519 (0.64% / 83.49%)
 Ligation Motif Present: 65,155  (0.29% / 37.90%)
 3' Bias (Long Range): 53% - 47%
 Pair Type intra chrom %(L-I-O-R): 11% - 68% - 11% - 11%
 Pair Type inter chrom %(L-I-O-R): 25% - 26% - 24% - 24%
 DE: 54%
 Cis/all (FF and RR orient): 89.5%
Inter-chromosomal: 6,944  (0.03% / 4.04%)
Intra-chromosomal: 136,575  (0.61% / 79.45%)
Short Range (<20,000bp): 94,497  (0.42% / 54.97%)
Long Range (>20,000bp): 42,078  (0.19% / 24.48%)