Experiment description: MoPh11_AsteI2_V4_second
Sequenced Read Pairs:  58,061,758
 Normal Paired: 25,116,759 (43.26%)
 Chimeric Paired: 5,059,084 (8.71%)
 Chimeric Ambiguous: 4,770,166 (8.22%)
 Unmapped: 23,115,749 (39.81%)
 Ligation Motif Present: 42,427,344 (73.07%)
Alignable (Normal+Chimeric Paired): 30,175,843 (51.97%)
Unique Reads: 5,061,691 (8.72%)
PCR Duplicates: 12,688,140 (21.85%)
Optical Duplicates: 12,426,012 (21.40%)
Library Complexity Estimate: 5,238,578
Intra-fragment Reads: 211,978 (0.37% / 4.19%)
Below MAPQ Threshold: 2,260,259 (3.89% / 44.65%)
Hi-C Contacts: 2,589,454 (4.46% / 51.16%)
 Ligation Motif Present: 1,716,782  (2.96% / 33.92%)
 3' Bias (Long Range): 59% - 41%
 Pair Type intra chrom %(L-I-O-R): 14% - 61% - 12% - 13%
 Pair Type inter chrom %(L-I-O-R): 26% - 25% - 25% - 24%
 DE: 30%
 Cis/all (FF and RR orient): 46.7%
Inter-chromosomal: 969,420  (1.67% / 19.15%)
Intra-chromosomal: 1,620,034  (2.79% / 32.01%)
Short Range (<20,000bp): 977,077  (1.68% / 19.30%)
Long Range (>20,000bp): 642,957  (1.11% / 12.70%)