Experiment description: MoPh14_AsteI2_V4_second
Sequenced Read Pairs:  5,470,229
 Normal Paired: 1,809,437 (33.08%)
 Chimeric Paired: 366,328 (6.70%)
 Chimeric Ambiguous: 470,745 (8.61%)
 Unmapped: 2,823,719 (51.62%)
 Ligation Motif Present: 3,058,000 (55.90%)
Alignable (Normal+Chimeric Paired): 2,175,765 (39.77%)
Unique Reads: 861,820 (15.75%)
PCR Duplicates: 573,252 (10.48%)
Optical Duplicates: 740,693 (13.54%)
Library Complexity Estimate: 1,276,695
Intra-fragment Reads: 44,269 (0.81% / 5.14%)
Below MAPQ Threshold: 376,636 (6.89% / 43.70%)
Hi-C Contacts: 440,915 (8.06% / 51.16%)
 Ligation Motif Present: 256,877  (4.70% / 29.81%)
 3' Bias (Long Range): 53% - 47%
 Pair Type intra chrom %(L-I-O-R): 10% - 71% - 9% - 10%
 Pair Type inter chrom %(L-I-O-R): 27% - 25% - 25% - 24%
 DE: 44%
 Cis/all (FF and RR orient): 49.2%
Inter-chromosomal: 124,976  (2.28% / 14.50%)
Intra-chromosomal: 315,939  (5.78% / 36.66%)
Short Range (<20,000bp): 226,842  (4.15% / 26.32%)
Long Range (>20,000bp): 89,097  (1.63% / 10.34%)