Sequenced Read Pairs: 13,176,081 Normal Paired: 5,614,954 (42.61%) Chimeric Paired: 1,593,822 (12.10%) Chimeric Ambiguous: 1,744,761 (13.24%) Unmapped: 4,222,544 (32.05%) Ligation Motif Present: 11,184,282 (84.88%) Alignable (Normal+Chimeric Paired): 7,208,776 (54.71%) Unique Reads: 2,887,340 (21.91%) PCR Duplicates: 1,968,851 (14.94%) Optical Duplicates: 2,352,585 (17.85%) Library Complexity Estimate: 4,227,950 Intra-fragment Reads: 106,007 (0.80% / 3.67%) Below MAPQ Threshold: 1,014,096 (7.70% / 35.12%) Hi-C Contacts: 1,767,237 (13.41% / 61.21%) Ligation Motif Present: 1,275,386 (9.68% / 44.17%) 3' Bias (Long Range): 68% - 32% Pair Type intra chrom %(L-I-O-R): 10% - 70% - 10% - 10% Pair Type inter chrom %(L-I-O-R): 27% - 25% - 24% - 24% DE: 36% Cis/all (FF and RR orient): 37.9% Inter-chromosomal: 706,100 (5.36% / 24.46%) Intra-chromosomal: 1,061,137 (8.05% / 36.75%) Short Range (<20,000bp): 752,646 (5.71% / 26.07%) Long Range (>20,000bp): 308,491 (2.34% / 10.68%)