Experiment description: MoPh11_hg19_AsteI2_V4_raw
Sequenced Read Pairs:  29,577,994
 Normal Paired: 20,597,143 (69.64%)
 Chimeric Paired: 6,037,113 (20.41%)
 Chimeric Ambiguous: 2,674,144 (9.04%)
 Unmapped: 269,594 (0.91%)
 Ligation Motif Present: 19,436,952 (65.71%)
Alignable (Normal+Chimeric Paired): 26,634,256 (90.05%)
Unique Reads: 25,834,947 (87.35%)
PCR Duplicates: 799,309 (2.70%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 434,824,816
Intra-fragment Reads: 1,603,576 (5.42% / 6.21%)
Below MAPQ Threshold: 5,147,898 (17.40% / 19.93%)
Hi-C Contacts: 19,083,473 (64.52% / 73.87%)
 Ligation Motif Present: 11,153,998  (37.71% / 43.17%)
 3' Bias (Long Range): 71% - 29%
 Pair Type intra chrom %(L-I-O-R): 11% - 68% - 11% - 11%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 47%
 Cis/all (FF and RR orient): 67.2%
Inter-chromosomal: 3,287,221  (11.11% / 12.72%)
Intra-chromosomal: 15,796,252  (53.41% / 61.14%)
Short Range (<20,000bp): 10,899,755  (36.85% / 42.19%)
Long Range (>20,000bp): 4,896,497  (16.55% / 18.95%)