Experiment description: Juicer version 1.5.6;9 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -d /mnt/storage/home/manuriddinov/Others/Varya/mESC_NSU_reads/mut_rep2_A8 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU -t 9 -o /mnt/storage/home/manuriddinov/Others/Varya/mESC_mut2 -n mESC_mut2 -q 30                                                                                                                                                                                                                                                                                                                                                                                                     
Sequenced Read Pairs:  356,597
 Normal Paired: 267,020 (74.88%)
 Chimeric Paired: 17,910 (5.02%)
 Chimeric Ambiguous: 7,528 (2.11%)
 Unmapped: 64,139 (17.99%)
 Ligation Motif Present: 166,600 (46.72%)
Alignable (Normal+Chimeric Paired): 284,930 (79.90%)
Unique Reads: 284,721 (79.84%)
PCR Duplicates: 166 (0.05%)
Optical Duplicates: 43 (0.01%)
Library Complexity Estimate: 244,364,675
Intra-fragment Reads: 19,520 (5.47% / 6.86%)
Below MAPQ Threshold: 83,298 (23.36% / 29.26%)
Hi-C Contacts: 181,903 (51.01% / 63.89%)
 Ligation Motif Present: 103,496  (29.02% / 36.35%)
 3' Bias (Long Range): 75% - 25%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 16,683  (4.68% / 5.86%)
Intra-chromosomal: 165,220  (46.33% / 58.03%)
Short Range (<20Kb): 99,884  (28.01% / 35.08%)
Long Range (>20Kb): 65,336  (18.32% / 22.95%)