Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.18" 2023-01-17; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2023-03-29_Phil/FFPE/Бол28700-1 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
Sequenced Read Pairs:  9,958
 Normal Paired: 5,144 (51.66%)
 Chimeric Paired: 3,985 (40.02%)
 Chimeric Ambiguous: 735 (7.38%)
 Unmapped: 94 (0.94%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 9,129 (91.68%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-03-30T08:54:23,973]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 9,113 (91.51%)
PCR Duplicates: 8 (0.08%)
Optical Duplicates: 8 (0.08%)
Library Complexity Estimate: 5,196,499
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 724 (7.27% / 7.94%)
Hi-C Contacts: 8,389 (84.24% / 92.06%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 9% - 71% - 10% - 10%
 Pair Type inter chrom %(L-I-O-R): 24% - 25% - 27% - 23%
 DE: 57%
 Cis/all (FF and RR orient): 79.1%
Inter-chromosomal: 788  (7.91% / 8.65%)
Intra-chromosomal: 7,601  (76.33% / 83.41%)
Short Range (<20,000bp): 5,911  (59.36% / 64.86%)
Long Range (>20,000bp): 1,690  (16.97% / 18.54%)