Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.18" 2023-01-17; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2023-03-29_Phil/FFPE/Бол3328kl23 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  9,291
 Normal Paired: 5,206 (56.03%)
 Chimeric Paired: 3,345 (36.00%)
 Chimeric Ambiguous: 666 (7.17%)
 Unmapped: 74 (0.80%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 8,551 (92.04%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-03-30T08:55:21,119]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 8,532 (91.83%)
PCR Duplicates: 14 (0.15%)
Optical Duplicates: 5 (0.05%)
Library Complexity Estimate: 2,605,511
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 1,156 (12.44% / 13.55%)
Hi-C Contacts: 7,376 (79.39% / 86.45%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 9% - 74% - 9% - 9%
 Pair Type inter chrom %(L-I-O-R): 24% - 28% - 22% - 27%
 DE: 62%
 Cis/all (FF and RR orient): 83.5%
Inter-chromosomal: 463  (4.98% / 5.43%)
Intra-chromosomal: 6,913  (74.41% / 81.02%)
Short Range (<20,000bp): 5,552  (59.76% / 65.07%)
Long Range (>20,000bp): 1,361  (14.65% / 15.95%)