Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "17.0.8" 2023-07-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -d /storage2/artemS/toMasha/74B -s none -p /storage2/artemS/hg19/chromsizes/hg19.chrom.sizes -z /storage2/artemS/hg19/hg19.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  12,503
 Normal Paired: 7,184 (57.46%)
 Chimeric Paired: 4,290 (34.31%)
 Chimeric Ambiguous: 947 (7.57%)
 Unmapped: 82 (0.66%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 11,474 (91.77%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-08-17T16:26:27,352]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 11,470 (91.74%)
PCR Duplicates: 3 (0.02%)
Optical Duplicates: 1 (0.01%)
Library Complexity Estimate: 21,934,463
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 1,721 (13.76% / 15.00%)
Hi-C Contacts: 9,749 (77.97% / 85.00%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 8% - 76% - 8% - 8%
 Pair Type inter chrom %(L-I-O-R): 26% - 25% - 24% - 25%
 DE: 62%
 Cis/all (FF and RR orient): 77.9%
Inter-chromosomal: 799  (6.39% / 6.97%)
Intra-chromosomal: 8,950  (71.58% / 78.03%)
Short Range (<20,000bp): 7,131  (57.03% / 62.17%)
Long Range (>20,000bp): 1,819  (14.55% / 15.86%)