Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "17.0.8" 2023-07-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -d /storage2/artemS/toMasha/79G -s none -p /storage2/artemS/hg19/chromsizes/hg19.chrom.sizes -z /storage2/artemS/hg19/hg19.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  18,101
 Normal Paired: 13,823 (76.37%)
 Chimeric Paired: 3,413 (18.86%)
 Chimeric Ambiguous: 669 (3.70%)
 Unmapped: 196 (1.08%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 17,236 (95.22%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2023-08-17T16:29:03,868]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 17,213 (95.09%)
PCR Duplicates: 21 (0.12%)
Optical Duplicates: 2 (0.01%)
Library Complexity Estimate: 7,065,938
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 2,306 (12.74% / 13.40%)
Hi-C Contacts: 14,907 (82.35% / 86.60%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 4% - 88% - 4% - 4%
 Pair Type inter chrom %(L-I-O-R): 20% - 28% - 25% - 26%
 DE: 82%
 Cis/all (FF and RR orient): 84.8%
Inter-chromosomal: 440  (2.43% / 2.56%)
Intra-chromosomal: 14,467  (79.92% / 84.05%)
Short Range (<20,000bp): 13,365  (73.84% / 77.64%)
Long Range (>20,000bp): 1,102  (6.09% / 6.40%)