Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/F3 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  29,892
 Normal Paired: 22,094 (73.91%)
 Chimeric Paired: 6,076 (20.33%)
 Chimeric Ambiguous: 1,047 (3.50%)
 Unmapped: 675 (2.26%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 28,170 (94.24%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-11-18T16:57:55,979]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 27,842 (93.14%)
PCR Duplicates: 328 (1.10%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,200,269
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 2,492 (8.34% / 8.95%)
Hi-C Contacts: 25,350 (84.81% / 91.05%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 8% - 78% - 7% - 7%
 Pair Type inter chrom %(L-I-O-R): 24% - 25% - 24% - 27%
 DE: 66%
 Cis/all (FF and RR orient): 81.0%
Inter-chromosomal: 1,598  (5.35% / 5.74%)
Intra-chromosomal: 23,752  (79.46% / 85.31%)
Short Range (<20,000bp): 20,219  (67.64% / 72.62%)
Long Range (>20,000bp): 3,533  (11.82% / 12.69%)