Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-12-15_Novogene/Maria/F5 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
Sequenced Read Pairs:  444,182
 Normal Paired: 318,932 (71.80%)
 Chimeric Paired: 98,928 (22.27%)
 Chimeric Ambiguous: 21,453 (4.83%)
 Unmapped: 4,869 (1.10%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 417,860 (94.07%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-12-15T16:57:43,222]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 343,925 (77.43%)
PCR Duplicates: 71,925 (16.19%)
Optical Duplicates: 2,010 (0.45%)
Library Complexity Estimate: 1,059,133
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 50,523 (11.37% / 14.69%)
Hi-C Contacts: 293,402 (66.05% / 85.31%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 5% - 86% - 5% - 5%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 24% - 25%
 DE: 78%
 Cis/all (FF and RR orient): 79.0%
Inter-chromosomal: 13,684  (3.08% / 3.98%)
Intra-chromosomal: 279,718  (62.97% / 81.33%)
Short Range (<20,000bp): 252,743  (56.90% / 73.49%)
Long Range (>20,000bp): 26,975  (6.07% / 7.84%)