R1 | /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t12/fastq/t12_R1.fastq.gz |
R2 | /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t12/fastq/t12_R2.fastq.gz |
Read Type | Paired-end |
Max Reads | 1,000,000 |
Rate Floor | 0.001 |
Reads Analyzed | 82,291 |
Threads | 16 |
Started | 2022-12-09T07:36:55.976841 |
Finished | 2022-12-09T07:37:05.242206 |
# | Pattern Name | Forward Strand | Reverse Strand | Length [bp] |
---|---|---|---|---|
1 | A7 | GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC | 34 |
2 | A5 | ACACTCTTTCCCTACACGACGCTCTTCCGATCT | AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | 33 |
3 | P5 | AATGATACGGCGACCACCGAGATCTACAC | GTGTAGATCTCGGTGGTCGCCGTATCATT | 29 |
4 | P7 | CAAGCAGAAGACGGCATACGAGAT | ATCTCGTATGCCGTCTTCTGCTTG | 24 |
5 | ME | CTGTCTCTTATACACATCT | AGATGTGTATAAGAGACAG | 19 |
6 | B_ | CCGAGCCCACGAGAC | GTCTCGTGGGCTCGG | 15 |
7 | A_ | TCGTCGGCAGCGTC | GACGCTGCCGACGA | 14 |
- | A7 | A5 | P5 | P7 | ME | B_ | A_ |
---|---|---|---|---|---|---|---|
A7 | good | good | good | good | good | good | good |
A5 | - | good | good | good | good | good | good |
P5 | - | - | good | good | good | good | good |
P7 | - | - | - | good | good | good | good |
ME | - | - | - | - | good | good | good |
B_ | - | - | - | - | - | good | good |
A_ | - | - | - | - | - | - | good |
Unrecognized Sequence | unknown |
K-mer Max Size | 15 |
Count | Percentage | Read Structure |
---|---|---|
49,323 | 59.937 | {unknown} |
11,213 | 13.626 | {B_:R}--{ME:R}--{unknown} |
8,225 | 9.995 | {kmer:13bp}--{ME:R}--{unknown} |
2,552 | 3.101 | {unknown}--{ME:R}--{unknown} |
1,869 | 2.271 | {kmer:10bp}--{ME:R}--{unknown} |
741 | 0.900 | {B_:R}--{unknown} |
728 | 0.885 | {kmer:14bp}--{ME:R}--{unknown} |
572 | 0.695 | {kmer:12bp}--{ME:R}--{unknown} |
498 | 0.605 | {unknown}--{B_:R}--{ME:R}--{unknown} |
468 | 0.569 | {kmer:11bp}--{ME:R}--{unknown} |
348 | 0.423 | {kmer:5bp}--{ME:R}--{unknown} |
283 | 0.344 | {kmer:7bp}--{ME:R}--{unknown} |
277 | 0.337 | {kmer:9bp}--{ME:R}--{unknown} |
234 | 0.284 | {kmer:3bp}--{ME:R}--{unknown} |
232 | 0.282 | {unknown}--{B_:R}--{unknown} |
216 | 0.262 | {unknown}--{ME:F}--{unknown} |
211 | 0.256 | {kmer:8bp}--{ME:R}--{unknown} |
177 | 0.215 | {kmer:6bp}--{ME:R}--{unknown} |
145 | 0.176 | {unknown}--{ME:F}--{A_:R}--{unknown} |
145 | 0.176 | {kmer:4bp}--{ME:R}--{unknown} |
97 | 0.118 | {kmer:2bp}--{ME:R}--{unknown} |
94 | 0.114 | {kmer:1bp}--{ME:R}--{unknown} |
85 | 0.103 | {kmer:1bp}--{B_:R}--{ME:R}--{unknown} |
Count | Percentage | Read Structure |
---|---|---|
63,787 | 77.514 | {unknown} |
1,747 | 2.123 | {unknown}--{ME:F}--{unknown} |
1,348 | 1.638 | {kmer:12bp}--{ME:R}--{unknown} |
1,317 | 1.600 | {kmer:13bp}--{ME:R}--{unknown} |
825 | 1.003 | {unknown}--{ME:F}--{B_:F}--{unknown} |
821 | 0.998 | {unknown}--{B_:F}--{unknown} |
504 | 0.612 | {unknown}--{A_:F}--{ME:R}--{unknown} |
446 | 0.542 | {kmer:5bp}--{B_:F}--{unknown} |
352 | 0.428 | {kmer:10bp}--{ME:R}--{unknown} |
341 | 0.414 | {kmer:13bp}--{B_:F}--{unknown} |
302 | 0.367 | {A_:F}--{ME:R}--{unknown} |
299 | 0.363 | {kmer:7bp}--{B_:F}--{unknown} |
291 | 0.354 | {kmer:2bp}--{B_:F}--{unknown} |
291 | 0.354 | {unknown}--{ME:R}--{unknown} |
208 | 0.253 | {kmer:10bp}--{B_:F}--{unknown} |
197 | 0.239 | {unknown}--{A_:R}--{unknown} |
167 | 0.203 | {kmer:9bp}--{ME:R}--{unknown} |
157 | 0.191 | {kmer:11bp}--{ME:F}--{B_:F}--{unknown} |
154 | 0.187 | {kmer:2bp}--{A_:R}--{unknown} |
152 | 0.185 | {kmer:4bp}--{B_:F}--{unknown} |
147 | 0.179 | {kmer:12bp}--{ME:F}--{B_:F}--{unknown} |
134 | 0.163 | {unknown}--{A_:F}--{unknown} |
128 | 0.156 | {kmer:5bp}--{ME:R}--{unknown} |
127 | 0.154 | {kmer:10bp}--{ME:F}--{B_:F}--{unknown} |
126 | 0.153 | {kmer:7bp}--{ME:F}--{B_:F}--{unknown} |
126 | 0.153 | {kmer:9bp}--{B_:F}--{unknown} |
124 | 0.151 | {kmer:1bp}--{ME:F}--{B_:F}--{unknown} |
117 | 0.142 | {ME:F}--{B_:F}--{unknown} |
116 | 0.141 | {kmer:9bp}--{ME:F}--{B_:F}--{unknown} |
107 | 0.130 | {kmer:13bp}--{ME:F}--{B_:F}--{unknown} |
105 | 0.128 | {kmer:4bp}--{ME:F}--{B_:F}--{unknown} |
102 | 0.124 | {kmer:3bp}--{B_:F}--{unknown} |
99 | 0.120 | {kmer:8bp}--{ME:F}--{B_:F}--{unknown} |
98 | 0.119 | {kmer:5bp}--{B_:F}--{A_:F}--{ME:R}--{unknown} |
96 | 0.117 | {kmer:8bp}--{B_:F}--{unknown} |
95 | 0.115 | {unknown}--{B_:F}--{A_:F}--{ME:R}--{unknown} |
87 | 0.106 | {kmer:11bp}--{B_:F}--{unknown} |
86 | 0.105 | {kmer:11bp}--{ME:R}--{unknown} |
84 | 0.102 | {kmer:5bp}--{ME:F}--{B_:F}--{unknown} |