| R1 | /storage2/nyt/Projects/Juicer-Out/2022-12-15_Novogene/Maria/t13/fastq/t13_concatenated_R1.fastq.gz |
| R2 | /storage2/nyt/Projects/Juicer-Out/2022-12-15_Novogene/Maria/t13/fastq/t13_concatenated_R2.fastq.gz |
| Read Type | Paired-end |
| Max Reads | 1,000,000 |
| Rate Floor | 0.001 |
| Reads Analyzed | 145,164 |
| Threads | 16 |
| Started | 2022-12-15T17:53:25.517078 |
| Finished | 2022-12-15T17:53:43.101719 |
| # | Pattern Name | Forward Strand | Reverse Strand | Length [bp] |
|---|---|---|---|---|
| 1 | A7 | GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC | 34 |
| 2 | A5 | ACACTCTTTCCCTACACGACGCTCTTCCGATCT | AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | 33 |
| 3 | P5 | AATGATACGGCGACCACCGAGATCTACAC | GTGTAGATCTCGGTGGTCGCCGTATCATT | 29 |
| 4 | P7 | CAAGCAGAAGACGGCATACGAGAT | ATCTCGTATGCCGTCTTCTGCTTG | 24 |
| 5 | ME | CTGTCTCTTATACACATCT | AGATGTGTATAAGAGACAG | 19 |
| 6 | B_ | CCGAGCCCACGAGAC | GTCTCGTGGGCTCGG | 15 |
| 7 | A_ | TCGTCGGCAGCGTC | GACGCTGCCGACGA | 14 |
| - | A7 | A5 | P5 | P7 | ME | B_ | A_ |
|---|---|---|---|---|---|---|---|
| A7 | good | good | good | good | good | good | good |
| A5 | - | good | good | good | good | good | good |
| P5 | - | - | good | good | good | good | good |
| P7 | - | - | - | good | good | good | good |
| ME | - | - | - | - | good | good | good |
| B_ | - | - | - | - | - | good | good |
| A_ | - | - | - | - | - | - | good |
| Unrecognized Sequence | unknown |
| K-mer Max Size | 15 |
| Count | Percentage | Read Structure |
|---|---|---|
| 132,993 | 91.616 | {unknown} |
| 3,793 | 2.613 | {kmer:13bp}--{ME:R}--{unknown} |
| 2,411 | 1.661 | {unknown}--{A7:R}--{unknown} |
| 1,023 | 0.705 | {kmer:10bp}--{ME:R}--{unknown} |
| 289 | 0.199 | {unknown}--{A7:R}--{kmer:10bp}--{P7:R}--{unknown} |
| 247 | 0.170 | {kmer:12bp}--{ME:R}--{unknown} |
| 191 | 0.132 | {kmer:5bp}--{ME:R}--{unknown} |
| 183 | 0.126 | {unknown}--{A7:R}--{kmer:2bp} |
| 180 | 0.124 | {unknown}--{A7:R}--{kmer:1bp} |
| 174 | 0.120 | {kmer:11bp}--{ME:R}--{unknown} |
| 170 | 0.117 | {unknown}--{A7:R}--{kmer:5bp} |
| 164 | 0.113 | {unknown}--{A7:R} |
| 162 | 0.112 | {unknown}--{A7:R}--{kmer:3bp} |
| 160 | 0.110 | {kmer:7bp}--{ME:R}--{unknown} |
| 159 | 0.110 | {unknown}--{A7:R}--{kmer:4bp} |
| 147 | 0.101 | {unknown}--{A7:R}--{kmer:7bp} |
| 147 | 0.101 | {unknown}--{A7:R}--{kmer:6bp} |
| 146 | 0.101 | {unknown}--{A7:R}--{kmer:8bp} |
| Count | Percentage | Read Structure |
|---|---|---|
| 138,472 | 95.390 | {unknown} |
| 2,422 | 1.668 | {unknown}--{A5:R}--{unknown} |
| 361 | 0.249 | {unknown}--{ME:F}--{unknown} |
| 238 | 0.164 | {unknown}--{A5:R}--{kmer:10bp}--{P5:R}--{unknown} |
| 189 | 0.130 | {kmer:12bp}--{ME:R}--{unknown} |
| 166 | 0.114 | {unknown}--{A5:R}--{kmer:6bp} |
| 164 | 0.113 | {unknown}--{A5:R}--{kmer:3bp} |
| 164 | 0.113 | {unknown}--{A5:R} |
| 156 | 0.107 | {unknown}--{A5:R}--{kmer:5bp} |
| 152 | 0.105 | {unknown}--{A5:R}--{kmer:4bp} |
| 152 | 0.105 | {unknown}--{A5:R}--{kmer:2bp} |