Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-12-15_Novogene/Maria/t13 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
Sequenced Read Pairs:  145,164
 Normal Paired: 110,906 (76.40%)
 Chimeric Paired: 28,266 (19.47%)
 Chimeric Ambiguous: 3,329 (2.29%)
 Unmapped: 2,663 (1.83%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 139,172 (95.87%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-12-15T17:01:36,566]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 107,980 (74.38%)
PCR Duplicates: 29,482 (20.31%)
Optical Duplicates: 1,710 (1.18%)
Library Complexity Estimate: 272,785
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 13,832 (9.53% / 12.81%)
Hi-C Contacts: 94,148 (64.86% / 87.19%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 4% - 91% - 1% - 4%
 Pair Type inter chrom %(L-I-O-R): 25% - 26% - 24% - 24%
 DE: 80%
 Cis/all (FF and RR orient): 76.0%
Inter-chromosomal: 4,546  (3.13% / 4.21%)
Intra-chromosomal: 89,602  (61.72% / 82.98%)
Short Range (<20,000bp): 87,390  (60.20% / 80.93%)
Long Range (>20,000bp): 2,212  (1.52% / 2.05%)