Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t2 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  15,617
 Normal Paired: 13,982 (89.53%)
 Chimeric Paired: 1,110 (7.11%)
 Chimeric Ambiguous: 186 (1.19%)
 Unmapped: 339 (2.17%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 15,092 (96.64%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-11-18T17:06:26,020]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 15,010 (96.11%)
PCR Duplicates: 82 (0.53%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,383,796
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 2,601 (16.65% / 17.33%)
Hi-C Contacts: 12,409 (79.46% / 82.67%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 1% - 97% - 1% - 1%
 Pair Type inter chrom %(L-I-O-R): 27% - 24% - 25% - 24%
 DE: 85%
 Cis/all (FF and RR orient): 22.6%
Inter-chromosomal: 1,421  (9.10% / 9.47%)
Intra-chromosomal: 10,988  (70.36% / 73.20%)
Short Range (<20,000bp): 10,677  (68.37% / 71.13%)
Long Range (>20,000bp): 311  (1.99% / 2.07%)