Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.17" 2022-10-18; /storage2/dreamworld/Tools/juicer1.6_compact/scripts/juicer.sh -g hg19 -d /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t4 -s none -p /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.chrom.sizes -z /storage2/dreamworld/Databases/hg19_canonical/hg19_canonical.fa -D /storage2/dreamworld/Tools/juicer1.6_compact -t 10                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
Sequenced Read Pairs:  16,309
 Normal Paired: 14,576 (89.37%)
 Chimeric Paired: 1,056 (6.47%)
 Chimeric Ambiguous: 193 (1.18%)
 Unmapped: 484 (2.97%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 15,632 (95.85%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-11-18T17:06:50,324]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 15,547 (95.33%)
PCR Duplicates: 85 (0.52%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 1,432,192
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 3,092 (18.96% / 19.89%)
Hi-C Contacts: 12,455 (76.37% / 80.11%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 1% - 98% - 1% - 1%
 Pair Type inter chrom %(L-I-O-R): 25% - 24% - 26% - 25%
 DE: 87%
 Cis/all (FF and RR orient): 25.5%
Inter-chromosomal: 1,212  (7.43% / 7.80%)
Intra-chromosomal: 11,243  (68.94% / 72.32%)
Short Range (<20,000bp): 11,000  (67.45% / 70.75%)
Long Range (>20,000bp): 243  (1.49% / 1.56%)