R1 | /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t5/fastq/t5_R1.fastq.gz |
R2 | /storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t5/fastq/t5_R2.fastq.gz |
Read Type | Paired-end |
Max Reads | 1,000,000 |
Rate Floor | 0.001 |
Reads Analyzed | 32,279 |
Threads | 16 |
Started | 2022-12-09T07:36:35.171938 |
Finished | 2022-12-09T07:36:38.874988 |
# | Pattern Name | Forward Strand | Reverse Strand | Length [bp] |
---|---|---|---|---|
1 | A7 | GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC | 34 |
2 | A5 | ACACTCTTTCCCTACACGACGCTCTTCCGATCT | AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | 33 |
3 | P5 | AATGATACGGCGACCACCGAGATCTACAC | GTGTAGATCTCGGTGGTCGCCGTATCATT | 29 |
4 | P7 | CAAGCAGAAGACGGCATACGAGAT | ATCTCGTATGCCGTCTTCTGCTTG | 24 |
5 | ME | CTGTCTCTTATACACATCT | AGATGTGTATAAGAGACAG | 19 |
6 | B_ | CCGAGCCCACGAGAC | GTCTCGTGGGCTCGG | 15 |
7 | A_ | TCGTCGGCAGCGTC | GACGCTGCCGACGA | 14 |
- | A7 | A5 | P5 | P7 | ME | B_ | A_ |
---|---|---|---|---|---|---|---|
A7 | good | good | good | good | good | good | good |
A5 | - | good | good | good | good | good | good |
P5 | - | - | good | good | good | good | good |
P7 | - | - | - | good | good | good | good |
ME | - | - | - | - | good | good | good |
B_ | - | - | - | - | - | good | good |
A_ | - | - | - | - | - | - | good |
Unrecognized Sequence | unknown |
K-mer Max Size | 15 |
Count | Percentage | Read Structure |
---|---|---|
24,238 | 75.089 | {unknown} |
2,672 | 8.278 | {B_:R}--{ME:R}--{unknown} |
987 | 3.058 | {unknown}--{ME:R}--{unknown} |
644 | 1.995 | {unknown}--{B_:R}--{ME:R}--{unknown} |
554 | 1.716 | {kmer:13bp}--{ME:R}--{unknown} |
194 | 0.601 | {kmer:14bp}--{ME:R}--{unknown} |
169 | 0.524 | {kmer:10bp}--{ME:R}--{unknown} |
150 | 0.465 | {unknown}--{ME:F}--{unknown} |
134 | 0.415 | {B_:R}--{unknown} |
106 | 0.328 | {unknown}--{ME:F}--{A_:R}--{unknown} |
95 | 0.294 | {kmer:3bp}--{B_:R}--{ME:R}--{unknown} |
85 | 0.263 | {kmer:5bp}--{B_:R}--{ME:R}--{unknown} |
84 | 0.260 | {unknown}--{B_:R}--{unknown} |
81 | 0.251 | {kmer:6bp}--{B_:R}--{ME:R}--{unknown} |
71 | 0.220 | {kmer:5bp}--{ME:R}--{unknown} |
60 | 0.186 | {kmer:9bp}--{B_:R}--{ME:R}--{unknown} |
59 | 0.183 | {kmer:1bp}--{B_:R}--{ME:R}--{unknown} |
53 | 0.164 | {kmer:7bp}--{B_:R}--{ME:R}--{unknown} |
48 | 0.149 | {kmer:7bp}--{ME:R}--{unknown} |
47 | 0.146 | {kmer:10bp}--{B_:R}--{ME:R}--{unknown} |
47 | 0.146 | {kmer:4bp}--{B_:R}--{ME:R}--{unknown} |
46 | 0.143 | {kmer:11bp}--{B_:R}--{ME:R}--{unknown} |
42 | 0.130 | {kmer:11bp}--{ME:R}--{unknown} |
41 | 0.127 | {unknown}--{A_:R}--{unknown} |
40 | 0.124 | {kmer:13bp}--{B_:R}--{ME:R}--{unknown} |
40 | 0.124 | {kmer:6bp}--{ME:R}--{unknown} |
39 | 0.121 | {kmer:12bp}--{ME:R}--{unknown} |
39 | 0.121 | {kmer:9bp}--{ME:R}--{unknown} |
39 | 0.121 | {kmer:8bp}--{B_:R}--{ME:R}--{unknown} |
36 | 0.112 | {kmer:12bp}--{B_:R}--{ME:R}--{unknown} |
33 | 0.102 | {kmer:8bp}--{ME:R}--{unknown} |
Count | Percentage | Read Structure |
---|---|---|
27,416 | 84.934 | {unknown} |
821 | 2.543 | {kmer:12bp}--{ME:R}--{unknown} |
769 | 2.382 | {kmer:13bp}--{ME:R}--{unknown} |
383 | 1.187 | {A_:F}--{ME:R}--{unknown} |
327 | 1.013 | {kmer:10bp}--{ME:R}--{unknown} |
192 | 0.595 | {kmer:9bp}--{ME:R}--{unknown} |
187 | 0.579 | {unknown}--{ME:F}--{unknown} |
184 | 0.570 | {unknown}--{ME:F}--{B_:F}--{unknown} |
124 | 0.384 | {kmer:5bp}--{ME:R}--{unknown} |
115 | 0.356 | {unknown}--{B_:F}--{unknown} |
87 | 0.270 | {kmer:7bp}--{ME:R}--{unknown} |
78 | 0.242 | {kmer:3bp}--{ME:R}--{unknown} |
65 | 0.201 | {kmer:6bp}--{ME:R}--{unknown} |
60 | 0.186 | {kmer:8bp}--{ME:R}--{unknown} |
57 | 0.177 | {unknown}--{A_:F}--{ME:R}--{unknown} |
54 | 0.167 | {unknown}--{ME:R}--{unknown} |
53 | 0.164 | {kmer:11bp}--{ME:R}--{unknown} |
49 | 0.152 | {kmer:4bp}--{ME:R}--{unknown} |
35 | 0.108 | {kmer:14bp}--{ME:R}--{unknown} |