FastContext Analysis Report

Run Data

R1	/storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t8/fastq/t8_R1.fastq.gz
R2	/storage2/nyt/Projects/Juicer-Out/2022-11-07_BGI_Moscow/Maria_stat/t8/fastq/t8_R2.fastq.gz
Read Type	Paired-end
Max Reads	1,000,000
Rate Floor	0.001

Performance

Reads Analyzed	23,994
Threads	16
Started	2022-12-09T07:36:42.365291
Finished	2022-12-09T07:36:45.027340

Patterns

Patterns List

#	Pattern Name	Forward Strand	Reverse Strand	Length [bp]
1	A7	GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT	AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC	34
2	A5	ACACTCTTTCCCTACACGACGCTCTTCCGATCT	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT	33
3	P5	AATGATACGGCGACCACCGAGATCTACAC	GTGTAGATCTCGGTGGTCGCCGTATCATT	29
4	P7	CAAGCAGAAGACGGCATACGAGAT	ATCTCGTATGCCGTCTTCTGCTTG	24
5	ME	CTGTCTCTTATACACATCT	AGATGTGTATAAGAGACAG	19
6	B_	CCGAGCCCACGAGAC	GTCTCGTGGGCTCGG	15
7	A_	TCGTCGGCAGCGTC	GACGCTGCCGACGA	14

Patterns Analysis

-	A7	A5	P5	P7	ME	B_	A_
A7	good	good	good	good	good	good	good
A5	-	good	good	good	good	good	good
P5	-	-	good	good	good	good	good
P7	-	-	-	good	good	good	good
ME	-	-	-	-	good	good	good
B_	-	-	-	-	-	good	good
A_	-	-	-	-	-	-	good

Other

Unrecognized Sequence	unknown
K-mer Max Size	15

Summary

R1

Count	Percentage	Read Structure
15,309	63.803	{unknown}
3,383	14.099	{B_:R}--{ME:R}--{unknown}
1,071	4.464	{kmer:13bp}--{ME:R}--{unknown}
957	3.988	{unknown}--{ME:R}--{unknown}
402	1.675	{unknown}--{B_:R}--{ME:R}--{unknown}
250	1.042	{kmer:10bp}--{ME:R}--{unknown}
209	0.871	{kmer:14bp}--{ME:R}--{unknown}
193	0.804	{B_:R}--{unknown}
115	0.479	{unknown}--{ME:F}--{unknown}
93	0.388	{kmer:5bp}--{ME:R}--{unknown}
93	0.388	{kmer:7bp}--{ME:R}--{unknown}
75	0.313	{unknown}--{ME:F}--{A_:R}--{unknown}
68	0.283	{kmer:12bp}--{ME:R}--{unknown}
63	0.263	{unknown}--{B_:R}--{unknown}
61	0.254	{kmer:6bp}--{ME:R}--{unknown}
59	0.246	{kmer:5bp}--{B_:R}--{ME:R}--{unknown}
58	0.242	{kmer:3bp}--{ME:R}--{unknown}
52	0.217	{kmer:11bp}--{ME:R}--{unknown}
49	0.204	{kmer:3bp}--{B_:R}--{ME:R}--{unknown}
45	0.188	{kmer:1bp}--{B_:R}--{ME:R}--{unknown}
43	0.179	{kmer:7bp}--{B_:R}--{ME:R}--{unknown}
42	0.175	{kmer:9bp}--{B_:R}--{ME:R}--{unknown}
42	0.175	{kmer:11bp}--{B_:R}--{ME:R}--{unknown}
40	0.167	{kmer:6bp}--{B_:R}--{ME:R}--{unknown}
37	0.154	{kmer:9bp}--{ME:R}--{unknown}
36	0.150	{kmer:13bp}--{B_:R}--{ME:R}--{unknown}
36	0.150	{kmer:8bp}--{ME:R}--{unknown}
30	0.125	{kmer:12bp}--{B_:R}--{ME:R}--{unknown}
28	0.117	{kmer:4bp}--{ME:R}--{unknown}
25	0.104	{kmer:4bp}--{B_:R}--{ME:R}--{unknown}

R2

Count	Percentage	Read Structure
18,107	75.465	{unknown}
611	2.546	{kmer:13bp}--{ME:R}--{unknown}
609	2.538	{kmer:12bp}--{ME:R}--{unknown}
285	1.188	{kmer:10bp}--{ME:R}--{unknown}
282	1.175	{A_:F}--{ME:R}--{unknown}
264	1.100	{unknown}--{ME:F}--{unknown}
213	0.888	{unknown}--{B_:F}--{unknown}
195	0.813	{unknown}--{ME:F}--{B_:F}--{unknown}
147	0.613	{kmer:9bp}--{ME:R}--{unknown}
123	0.513	{kmer:5bp}--{B_:F}--{unknown}
117	0.488	{unknown}--{A_:F}--{ME:R}--{unknown}
106	0.442	{kmer:7bp}--{ME:R}--{unknown}
102	0.425	{kmer:5bp}--{ME:R}--{unknown}
94	0.392	{kmer:2bp}--{B_:F}--{unknown}
93	0.388	{unknown}--{ME:R}--{unknown}
87	0.363	{kmer:7bp}--{B_:F}--{unknown}
84	0.350	{kmer:13bp}--{B_:F}--{unknown}
68	0.283	{kmer:8bp}--{ME:R}--{unknown}
66	0.275	{kmer:6bp}--{ME:R}--{unknown}
56	0.233	{kmer:2bp}--{A_:R}--{unknown}
56	0.233	{unknown}--{A_:R}--{unknown}
55	0.229	{kmer:4bp}--{ME:R}--{unknown}
54	0.225	{kmer:3bp}--{ME:R}--{unknown}
51	0.213	{unknown}--{A_:F}--{unknown}
50	0.208	{kmer:4bp}--{B_:F}--{unknown}
45	0.188	{ME:F}--{B_:F}--{unknown}
41	0.171	{kmer:14bp}--{ME:R}--{unknown}
39	0.163	{kmer:9bp}--{B_:F}--{unknown}
38	0.158	{kmer:11bp}--{ME:R}--{unknown}
38	0.158	{kmer:10bp}--{B_:F}--{unknown}
36	0.150	{kmer:1bp}--{ME:R}--{unknown}
34	0.142	{kmer:2bp}--{B_:F}--{A_:F}--{ME:R}--{unknown}
34	0.142	{kmer:9bp}--{A_:R}--{unknown}
34	0.142	{unknown}--{B_:F}--{A_:F}--{ME:R}--{unknown}
33	0.138	{kmer:3bp}--{B_:F}--{unknown}
31	0.129	{kmer:11bp}--{ME:F}--{B_:F}--{unknown}
29	0.121	{kmer:4bp}--{A_:R}--{unknown}
28	0.117	{kmer:12bp}--{ME:F}--{B_:F}--{unknown}
26	0.108	{kmer:5bp}--{B_:F}--{A_:F}--{ME:R}--{unknown}
25	0.104	{kmer:8bp}--{ME:F}--{B_:F}--{unknown}
25	0.104	{A_:R}--{unknown}
25	0.104	{kmer:13bp}--{B_:F}--{A_:F}--{ME:R}--{unknown}