| R1 | /storage2/nyt/Projects/Demultiplexing/september2022-BGI-Moscow/test2/tn3/tn3_R1.fastq.gz |
| R2 | /storage2/nyt/Projects/Demultiplexing/september2022-BGI-Moscow/test2/tn3/tn3_R2.fastq.gz |
| Read Type | Paired-end |
| Max Reads | 1,000,000 |
| Rate Floor | 0.001 |
| Reads Analyzed | 83,512 |
| Threads | 16 |
| Started | 2022-12-09T07:40:50.455665 |
| Finished | 2022-12-09T07:40:59.934264 |
| # | Pattern Name | Forward Strand | Reverse Strand | Length [bp] |
|---|---|---|---|---|
| 1 | A7 | GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT | AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC | 34 |
| 2 | A5 | ACACTCTTTCCCTACACGACGCTCTTCCGATCT | AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT | 33 |
| 3 | P5 | AATGATACGGCGACCACCGAGATCTACAC | GTGTAGATCTCGGTGGTCGCCGTATCATT | 29 |
| 4 | P7 | CAAGCAGAAGACGGCATACGAGAT | ATCTCGTATGCCGTCTTCTGCTTG | 24 |
| 5 | ME | CTGTCTCTTATACACATCT | AGATGTGTATAAGAGACAG | 19 |
| 6 | B_ | CCGAGCCCACGAGAC | GTCTCGTGGGCTCGG | 15 |
| 7 | A_ | TCGTCGGCAGCGTC | GACGCTGCCGACGA | 14 |
| - | A7 | A5 | P5 | P7 | ME | B_ | A_ |
|---|---|---|---|---|---|---|---|
| A7 | good | good | good | good | good | good | good |
| A5 | - | good | good | good | good | good | good |
| P5 | - | - | good | good | good | good | good |
| P7 | - | - | - | good | good | good | good |
| ME | - | - | - | - | good | good | good |
| B_ | - | - | - | - | - | good | good |
| A_ | - | - | - | - | - | - | good |
| Unrecognized Sequence | unknown |
| K-mer Max Size | 15 |
| Count | Percentage | Read Structure |
|---|---|---|
| 39,048 | 46.757 | {unknown} |
| 30,640 | 36.689 | {B_:R}--{ME:R}--{unknown} |
| 6,283 | 7.523 | {unknown}--{ME:R}--{unknown} |
| 2,053 | 2.458 | {kmer:14bp}--{ME:R}--{unknown} |
| 1,402 | 1.679 | {B_:R}--{unknown} |
| 669 | 0.801 | {kmer:4bp}--{ME:R}--{unknown} |
| 635 | 0.760 | {kmer:9bp}--{ME:R}--{unknown} |
| 510 | 0.611 | {kmer:5bp}--{ME:R}--{unknown} |
| 478 | 0.572 | {kmer:13bp}--{ME:R}--{unknown} |
| 271 | 0.325 | {kmer:6bp}--{ME:R}--{unknown} |
| 206 | 0.247 | {kmer:7bp}--{ME:R}--{unknown} |
| 177 | 0.212 | {kmer:12bp}--{ME:R}--{unknown} |
| 148 | 0.177 | {ME:R}--{unknown} |
| 133 | 0.159 | {kmer:2bp}--{ME:R}--{unknown} |
| 121 | 0.145 | {kmer:11bp}--{ME:R}--{unknown} |
| 111 | 0.133 | {kmer:1bp}--{ME:R}--{unknown} |
| 86 | 0.103 | {kmer:10bp}--{ME:R}--{unknown} |
| Count | Percentage | Read Structure |
|---|---|---|
| 41,404 | 49.579 | {unknown} |
| 32,137 | 38.482 | {A_:F}--{ME:R}--{unknown} |
| 2,690 | 3.221 | {kmer:13bp}--{ME:R}--{unknown} |
| 1,412 | 1.691 | {kmer:14bp}--{ME:R}--{unknown} |
| 809 | 0.969 | {A_:F}--{unknown} |
| 780 | 0.934 | {kmer:4bp}--{ME:R}--{unknown} |
| 720 | 0.862 | {unknown}--{ME:R}--{unknown} |
| 678 | 0.812 | {kmer:5bp}--{ME:R}--{unknown} |
| 625 | 0.748 | {kmer:12bp}--{ME:R}--{unknown} |
| 294 | 0.352 | {kmer:7bp}--{ME:R}--{unknown} |
| 269 | 0.322 | {kmer:11bp}--{ME:R}--{unknown} |
| 213 | 0.255 | {kmer:9bp}--{ME:R}--{unknown} |
| 205 | 0.245 | {kmer:6bp}--{ME:R}--{unknown} |
| 187 | 0.224 | {kmer:2bp}--{ME:R}--{unknown} |
| 187 | 0.224 | {kmer:1bp}--{ME:R}--{unknown} |
| 163 | 0.195 | {ME:R}--{unknown} |
| 156 | 0.187 | {kmer:8bp}--{ME:R}--{unknown} |
| 126 | 0.151 | {kmer:10bp}--{ME:R}--{unknown} |