Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg38 -z /Data/DataBases/hg38/hg38_canonic.fa -p /Data/DataBases/hg38/hg38_canonic.chrom.sizes -s none -d /Data/NGS_Data/20211206_cut_praimers_cutIL/New                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  4,924,292
 Normal Paired: 4,659,883 (94.63%)
 Chimeric Paired: 154,489 (3.14%)
 Chimeric Ambiguous: 25,347 (0.51%)
 Unmapped: 84,573 (1.72%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 4,814,372 (97.77%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-12-07T14:24:22,965]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 4,728,314 (96.02%)
PCR Duplicates: 0 (0.00%)
Optical Duplicates: 86,058 (1.75%)
Library Complexity Estimate: 0
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 366,771 (7.45% / 7.76%)
Hi-C Contacts: 4,361,543 (88.57% / 92.24%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 63,991  (1.30% / 1.35%)
Intra-chromosomal: 4,297,552  (87.27% / 90.89%)
Short Range (<20Kb): 4,184,029  (84.97% / 88.49%)
Long Range (>20Kb): 113,429  (2.30% / 2.40%)