Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.11" 2021-04-20; /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer/scripts/juicer.sh -t 10 -D /Data/UserData/FairWind/Ya.Cloud/core/pipeline/juicer -g hg38 -z /Data/DataBases/hg38/hg38_canonic.fa -p /Data/DataBases/hg38/hg38_canonic.chrom.sizes -s none -d /Data/NGS_Data/20211206_cut_praimers_cutIL/New                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  4,924,292
 Normal Paired: 4,659,883 (94.63%)
 Chimeric Paired: 154,489 (3.14%)
 Chimeric Ambiguous: 25,347 (0.51%)
 Unmapped: 84,573 (1.72%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 4,814,372 (97.77%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2021-12-07T14:24:22,965]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 4,728,314 (96.02%)
PCR Duplicates: 0 (0.00%)
Optical Duplicates: 86,058 (1.75%)
Library Complexity Estimate: 0
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 517,528 (10.51% / 10.95%)
Hi-C Contacts: 4,210,786 (85.51% / 89.05%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 50,856  (1.03% / 1.08%)
Intra-chromosomal: 4,159,930  (84.48% / 87.98%)
Short Range (<20Kb): 4,057,108  (82.39% / 85.80%)
Long Range (>20Kb): 102,758  (2.09% / 2.17%)