Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 10 threads; openjdk version "11.0.15" 2022-04-19; /Data/Tools/juicer1.6_compact/scripts/juicer.sh -t 10 -D /Data/Tools/juicer1.6_compact -g hg19 -z /Data/DataBases/hg19_Canonic/hg19.fa -p /Data/DataBases/hg19_Canonic/hg19.chrom.sizes -s none -d /Data/NGS_Data/20211206_cut_praimers_cutIL/New                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  4,924,292
 Normal Paired: 4,642,681 (94.28%)
 Chimeric Paired: 156,279 (3.17%)
 Chimeric Ambiguous: 29,296 (0.59%)
 Unmapped: 96,036 (1.95%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 4,798,960 (97.45%)
WARNING: sun.reflect.Reflection.getCallerClass is not supported. This will impact performance.
WARN [2022-05-06T17:26:46,495]  [Globals.java:138] [main]  Development mode is enabled
Unique Reads: 4,680,054 (95.04%)
PCR Duplicates: 0 (0.00%)
Optical Duplicates: 118,906 (2.41%)
Library Complexity Estimate: 0
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 292,340 (5.94% / 6.25%)
Hi-C Contacts: 4,387,714 (89.10% / 93.75%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 73,666  (1.50% / 1.57%)
Intra-chromosomal: 4,314,048  (87.61% / 92.18%)
Short Range (<20Kb): 4,200,246  (85.30% / 89.75%)
Long Range (>20Kb): 113,702  (2.31% / 2.43%)