cutadapt -e 0 -g ATGTCAGA -j 16 --action=none -o untrimmed_0_mismatch_SC5_R1_001.fastq.gz -p untrimmed_0_mismatch_SC5_R2_001.fastq.gz Undetermined_S0_R1_001.fastq.gz Undetermined_S0_R2_001.fastq.gz This is cutadapt 2.6 with Python 3.7.16 Command line parameters: -e 0 -g ATGTCAGA -j 16 --action=none -o untrimmed_0_mismatch_SC5_R1_001.fastq.gz -p untrimmed_0_mismatch_SC5_R2_001.fastq.gz Undetermined_S0_R1_001.fastq.gz Undetermined_S0_R2_001.fastq.gz Processing reads on 16 cores in paired-end mode ... [->8 ] 02:32:09 533,660,953 reads @ 17.1 µs/read; 3.51 M reads/minute Finished in 9129.61 s (17 us/read; 3.51 M reads/minute). === Summary === Total read pairs processed: 533,660,953 Read 1 with adapter: 12,555,885 (2.4%) Read 2 with adapter: 0 (0.0%) Pairs written (passing filters): 533,660,953 (100.0%) Total basepairs processed: 159,570,593,183 bp Read 1: 79,900,650,894 bp Read 2: 79,669,942,289 bp Total written (filtered): 159,570,593,183 bp (100.0%) Read 1: 79,900,650,894 bp Read 2: 79,669,942,289 bp === First read: Adapter 1 === Sequence: ATGTCAGA; Type: regular 5'; Length: 8; Trimmed: 12555885 times. No. of allowed errors: 0-8 bp: 0 Overview of removed sequences length count expect max.err error counts 3 8744416 8338452.4 0 8744416 4 2719114 2084613.1 0 2719114 5 501715 521153.3 0 501715 6 187979 130288.3 0 187979 7 8488 32572.1 0 8488 8 1156 8143.0 0 1156 9 1066 8143.0 0 1066 10 1179 8143.0 0 1179 11 2537 8143.0 0 2537 12 2351 8143.0 0 2351 13 4655 8143.0 0 4655 14 4999 8143.0 0 4999 15 2543 8143.0 0 2543 16 2499 8143.0 0 2499 17 2779 8143.0 0 2779 18 2596 8143.0 0 2596 19 2834 8143.0 0 2834 20 3129 8143.0 0 3129 21 3075 8143.0 0 3075 22 2484 8143.0 0 2484 23 2940 8143.0 0 2940 24 2702 8143.0 0 2702 25 2625 8143.0 0 2625 26 3568 8143.0 0 3568 27 2499 8143.0 0 2499 28 2773 8143.0 0 2773 29 2388 8143.0 0 2388 30 2642 8143.0 0 2642 31 2484 8143.0 0 2484 32 2753 8143.0 0 2753 33 2609 8143.0 0 2609 34 2905 8143.0 0 2905 35 2515 8143.0 0 2515 36 2879 8143.0 0 2879 37 3551 8143.0 0 3551 38 2468 8143.0 0 2468 39 2573 8143.0 0 2573 40 2520 8143.0 0 2520 41 2746 8143.0 0 2746 42 2851 8143.0 0 2851 43 2567 8143.0 0 2567 44 3270 8143.0 0 3270 45 3563 8143.0 0 3563 46 2632 8143.0 0 2632 47 2634 8143.0 0 2634 48 2746 8143.0 0 2746 49 2684 8143.0 0 2684 50 2688 8143.0 0 2688 51 2408 8143.0 0 2408 52 2737 8143.0 0 2737 53 2642 8143.0 0 2642 54 2472 8143.0 0 2472 55 2554 8143.0 0 2554 56 2418 8143.0 0 2418 57 2527 8143.0 0 2527 58 2438 8143.0 0 2438 59 2989 8143.0 0 2989 60 2704 8143.0 0 2704 61 2590 8143.0 0 2590 62 2836 8143.0 0 2836 63 2760 8143.0 0 2760 64 2670 8143.0 0 2670 65 2885 8143.0 0 2885 66 2771 8143.0 0 2771 67 2552 8143.0 0 2552 68 2640 8143.0 0 2640 69 2605 8143.0 0 2605 70 2685 8143.0 0 2685 71 2614 8143.0 0 2614 72 2572 8143.0 0 2572 73 2501 8143.0 0 2501 74 2620 8143.0 0 2620 75 2722 8143.0 0 2722 76 2618 8143.0 0 2618 77 2760 8143.0 0 2760 78 2690 8143.0 0 2690 79 2837 8143.0 0 2837 80 3057 8143.0 0 3057 81 2766 8143.0 0 2766 82 2835 8143.0 0 2835 83 2631 8143.0 0 2631 84 2584 8143.0 0 2584 85 2819 8143.0 0 2819 86 2674 8143.0 0 2674 87 2631 8143.0 0 2631 88 2852 8143.0 0 2852 89 2581 8143.0 0 2581 90 2848 8143.0 0 2848 91 2809 8143.0 0 2809 92 3371 8143.0 0 3371 93 2674 8143.0 0 2674 94 2653 8143.0 0 2653 95 2614 8143.0 0 2614 96 3072 8143.0 0 3072 97 2808 8143.0 0 2808 98 2623 8143.0 0 2623 99 2563 8143.0 0 2563 100 2647 8143.0 0 2647 101 2589 8143.0 0 2589 102 2723 8143.0 0 2723 103 2578 8143.0 0 2578 104 3578 8143.0 0 3578 105 2668 8143.0 0 2668 106 2774 8143.0 0 2774 107 2779 8143.0 0 2779 108 2724 8143.0 0 2724 109 2718 8143.0 0 2718 110 2478 8143.0 0 2478 111 2960 8143.0 0 2960 112 2726 8143.0 0 2726 113 2872 8143.0 0 2872 114 3115 8143.0 0 3115 115 2880 8143.0 0 2880 116 2925 8143.0 0 2925 117 3067 8143.0 0 3067 118 2967 8143.0 0 2967 119 3131 8143.0 0 3131 120 2956 8143.0 0 2956 121 2965 8143.0 0 2965 122 2961 8143.0 0 2961 123 2739 8143.0 0 2739 124 2933 8143.0 0 2933 125 2984 8143.0 0 2984 126 2808 8143.0 0 2808 127 2890 8143.0 0 2890 128 2883 8143.0 0 2883 129 3153 8143.0 0 3153 130 3189 8143.0 0 3189 131 2753 8143.0 0 2753 132 2753 8143.0 0 2753 133 3223 8143.0 0 3223 134 2893 8143.0 0 2893 135 2822 8143.0 0 2822 136 2663 8143.0 0 2663 137 2948 8143.0 0 2948 138 2880 8143.0 0 2880 139 2830 8143.0 0 2830 140 2752 8143.0 0 2752 141 2780 8143.0 0 2780 142 2874 8143.0 0 2874 143 2696 8143.0 0 2696 144 2866 8143.0 0 2866 145 2770 8143.0 0 2770 146 2798 8143.0 0 2798 147 2910 8143.0 0 2910 148 2844 8143.0 0 2844 149 2585 8143.0 0 2585 150 1234 8143.0 0 1234