Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O18 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O18 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  16,284,851
 Normal Paired: 15,381,859 (94.46%)
 Chimeric Paired: 386,327 (2.37%)
 Chimeric Ambiguous: 89,182 (0.55%)
 Unmapped: 427,483 (2.63%)
 Ligation Motif Present: 7,393,995 (45.40%)
Alignable (Normal+Chimeric Paired): 15,768,186 (96.83%)
Unique Reads: 14,482,191 (88.93%)
PCR Duplicates: 1,285,995 (7.90%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 91,339,757
Intra-fragment Reads: 7,830,009 (48.08% / 54.07%)
Below MAPQ Threshold: 154,751 (0.95% / 1.07%)
Hi-C Contacts: 6,497,431 (39.90% / 44.86%)
 Ligation Motif Present: 5,844,925  (35.89% / 40.36%)
 3' Bias (Long Range): 71% - 29%
 Pair Type %(L-I-O-R): 23% - 21% - 34% - 23%
Inter-chromosomal: 31,181  (0.19% / 0.22%)
Intra-chromosomal: 6,466,250  (39.71% / 44.65%)
Short Range (<20Kb): 6,413,776  (39.38% / 44.29%)
Long Range (>20Kb): 52,474  (0.32% / 0.36%)