Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/FM/5 -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates_out/FM/5 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                                                       
Sequenced Read Pairs:  1,418,420
 Normal Paired: 1,276,157 (89.97%)
 Chimeric Paired: 72,310 (5.10%)
 Chimeric Ambiguous: 37,519 (2.65%)
 Unmapped: 32,434 (2.29%)
 Ligation Motif Present: 949,308 (66.93%)
Alignable (Normal+Chimeric Paired): 1,348,467 (95.07%)
Unique Reads: 1,284,032 (90.53%)
PCR Duplicates: 61,461 (4.33%)
Optical Duplicates: 2,974 (0.21%)
Library Complexity Estimate: 14,275,645
Intra-fragment Reads: 29,652 (2.09% / 2.31%)
Below MAPQ Threshold: 270,873 (19.10% / 21.10%)
Hi-C Contacts: 983,507 (69.34% / 76.60%)
 Ligation Motif Present: 652,128  (45.98% / 50.79%)
 3' Bias (Long Range): 73% - 27%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 316,397  (22.31% / 24.64%)
Intra-chromosomal: 667,110  (47.03% / 51.95%)
Short Range (<20Kb): 490,192  (34.56% / 38.18%)
Long Range (>20Kb): 176,913  (12.47% / 13.78%)