for file in /datasets/DNA_TW_Loops/sorted/pseudoloops/short_mfold_stem_5.bed.sorted.bed /datasets/DNA_TW_Loops/sorted/pseudoloops/short_mfold_stem_6.bed.sorted.bed /datasets/DNA_TW_Loops/sorted/pseudoloops/short_mfold_stem_7.bed.sorted.bed; do {
	for number in $( seq 100 ); do {
		bedtools shuffle -i $file -g /datasets/DNA_TW_Loops/sorted/hg38.chrom.sizes > $file.shuffle-${number}.bed;
		echo "${file} ${number}";
	} done;
} done
