413574 + 0 in total (QC-passed reads + QC-failed reads)
412314 + 0 primary
0 + 0 secondary
1260 + 0 supplementary
68444 + 0 duplicates
68444 + 0 primary duplicates
202124 + 0 mapped (48.87% : N/A)
200864 + 0 primary mapped (48.72% : N/A)
412314 + 0 paired in sequencing
206157 + 0 read1
206157 + 0 read2
199058 + 0 properly paired (48.28% : N/A)
200348 + 0 with itself and mate mapped
516 + 0 singletons (0.13% : N/A)
400 + 0 with mate mapped to a different chr
197 + 0 with mate mapped to a different chr (mapQ>=5)